• Skip to main content
  • Skip to primary sidebar
Meat Rabbits
menu icon
go to homepage
  • General
  • Breeding
  • Breeds
  • Equipment
  • Feeding
  • Health
  • Housing
  • Processing
  • Recipes
search icon
Homepage link
  • General
  • Breeding
  • Breeds
  • Equipment
  • Feeding
  • Health
  • Housing
  • Processing
  • Recipes
ร—

How Cleaning Works with Stacked Rabbit Cage Systems

Modified: Feb 13, 2025 by Mary Ward ยท This post may contain affiliate links ยท 2 Comments

Hereโ€™s a Frequently Asked Question:

How do you clean the stacking meat rabbit cages?

And relatedly,

How do the rabbits in the bottom tiers stay clean?

39 Meat rabbit cages to clean
This looks like a lot of cages to clean, but these 39 cages can be cleaned easily in under and hour.
Jump to:
  • Itโ€™s All About the Drop Pan System
  • What a Typical Cleaning Day Process Looks Like in the Rabbit Room
  • Why I Use Shavings in the Drop Pans
  • What Happens to the Waste?
  • How Long Does All This Take?
  • Tips and Tricks that Help Keep Trays Clean, Odors Down, and Fast, Efficient Barn Cleaning

Itโ€™s All About the Drop Pan System

Dropping pan pulled out on a meat rabbit cage
Drop pans in stackable cages keep rabbits clean and make for easy cleaning in the rabbit room.

First, letโ€™s alleviate some concerns regarding how the rabbits below the top level stay clean.

No rabbits are pooped or urinated on in this system.

Each cage has a set of slide rails attached to the bottom of the frame kit. There is a drop pan with the same measurements as the cage. This slides in on the rails and catches all the manure and urine from the cage above.

This is a very clean system that also does a great job, for the most part, of keeping the barn floor clean. I do not have piles of manure under the cages, which goes a long way to keep my floors clean and mostly insect and maggot-free (in warm months). It does a lot to save my wood barn floors!!

What a Typical Cleaning Day Process Looks Like in the Rabbit Room

Meat rabbit in a cage
Each tray gets pulled out, dumped, scraped or sprayed out (in warm weather), then bedded and returned to the cage.

Cleaning these cages is a simple matter of pulling trays, dumping them into something, and then hauling away the mess.

I am lucky to own a Kubota UTV that has a dump body. So, my process is

  • Pull about 5 trays at a time, stack them atop a rolling shavings bin
  • Wheel the bins out to the door, where the UTV is parked
  • Dump each tray into the UTV
  • In warm months when I can run a hose, each tray gets sprayed out and drained for a few minutes while I work the next set
  • In cold months, I keep a 4-inch putty knife with me and scrape out anything that might get stuck or frozen in. This is only an issue in the coldest of weather. Most of the time, the trays dump out quite cleanly, even when itโ€™s below freezing.
  • The trays come back in, get a light layer of shavings in the bottom, and then are slid back into the rails
  • Of course, if I needed to, I could walk each tray individually out to the UTV and dump it. That's what I did before I inherited the shavings bin on wheels.
  • Done.

A wheelbarrow or barn cart would work well to go around to each cage and dump the trays. I do like taking them to the outside of the barn either way, because I like to spray the trays out when I can. It helps a lot with odor and insect control, having the trays sprayed out once a week.

https://youtu.be/W-xFZIVVv_0

Why I Use Shavings in the Drop Pans

Shavings for lining drop pans
Shavings help to take up the slop so there is no sloshing urine. They keep odors and standing wetness down, too, which improves air quality and reduces fly presence.

I choose to use a light layer of shavings at the bottom of my pans. You donโ€™t have to, but there are some solid reasons why I do.

  • Without something absorbent, the trays will get quite sloppy by the end of the week
  • Liquid urine is less fun to carry around than urine soaked up in shavings!
  • The shavings do a lot to keep odors down, especially in the summer
  • Less wetness and liquid equals fewer flies laying eggs and better fly control
  • Other products some people use are absorbent pellets designed for bedding stalls (usually marketed mostly towards horses) and a product called Sweet PDZ stall or coop refresher, which is said to work excellently for odor control
Bucket of barn lime
Barn grip lime helps soak up urine and odors and controls pathogens and flies.
  • If insect presence is high, I will sometimes also sprinkle a light layer of lime on the bottoms of the trays. It helps with odor and insects but does not take up enough of the urine to make it less sloppy.

What Happens to the Waste?

Rabbit waste in  UTV
Rabbit waste is a "cold manure" that can go straight on gardens, berry bushes, and orchards.

All of the waste goes straight to my elderberry orchard, fruit tree orchard, or garden beds. I use it for mulch and fertilizer, either tilled into the soil or as a weed-suppressing top dressing on the rows.

I donโ€™t typically compost the waste because the manure is cold manure and doesnโ€™t need to be composted or aged. The urine, which is a good source of nitrogen, is diluted enough in the shavings that it doesnโ€™t present much of a problem as long as Iโ€™m not piling it too thickly or up against tender plant stems (which would be a problem with any type of mulch or compost).

If you are concerned, just spray down the pile before spreading it or water the waste on the beds immediately after spreading, which will further dilute the urine.

Diluted urine at a rate of 4:1 or 5:1 is harmless and can actually be used as a foliar spray for a nitrogen boost.

Anything that is spread on beds or rows during the dormant months of fall and winter isnโ€™t a problem at all, and the urine is well diluted or washed into the ground by spring.

How Long Does All This Take?

Meat rabbit grow outs in stacked cages
Cleaning takes about an hour each week, start to finish, when all the cages are full.

That depends on how many rabbits I have and how many cages are full with bodies.

I have 39 โ€œholes,โ€ or, basically, cages. Thatโ€™s 39 trays to clean. They vary in size from 24 inches square to 30 by 36 inches.

Cleaning doesn't really take any longer for the larger cages than it does for the smaller cages. Iโ€™m still only pulling one tray per hole.

If I have no grow outs, and Iโ€™m only cleaning my 12 breeding rabbits, This would only take about 15 to 20 minutes for the whole barn. Thatโ€™s an estimate because that never really happens.

There are times when my grow out numbers are low, but I pretty much have never had only breeder cages since I started breeding. There are always kits with a doe and grow outs in some cages. Thatโ€™s true even after a harvest because the grow outs are of varying ages and stages.

On a cleaning day, when Iโ€™m cleaning about half the cages, it takes around 45 minutes.

With all the cages full, it is about an hour to an hour.

Tips and Tricks that Help Keep Trays Clean, Odors Down, and Fast, Efficient Barn Cleaning

Meat rabbit does in stackable cages
Weekly cleaning keeps flies and parasites at bay.
  • Pick a day of the week when you can commit to cleaning and clean trays at least weekly
  • In the height of summer and fly season, itโ€™s not a bad idea to clean twice each week (and itโ€™s easy enough to do, so itโ€™s manageable)
  • Have something on wheels to dump waste into -- either motorized or a hand cart
  • A deep yard or garden cart is a good option and will probably be easier to dump into than a wheelbarrow
  • Have a plan for your waste. Youโ€™ll have it every week.
  • If you canโ€™t use it, sell it
  • The mixed waste makes a great hot compost pile. It tends to be well balanced in browns and greens between the grass-based manure and the shavings, and the urine gives the pile moisture. A lot of people say they donโ€™t need to add anything else to the pile.

A regular routine of tray cleaning will keep all the manure and muck away from your rabbits. It will reduce odors and keep your air quality good. Flies are easily controlled since they are denied a lot of the conditions they need for egg laying and breeding, and the trays are emptied regularly enough so as to break their life cycle before it can get very far.

Routine cleaning will also reduce exposure to mites and insects, which will go very far in maintaining the health and well-being of your rabbits, as well as the comfort of your rabbit barn -- for the rabbits and for you!

Young rabbit grow out kits in a cage
Shavings in cage dropping pans keep liquid manageable and helps with odor control, too.

Overall, I find this to be an excellent system for keeping rabbits. I donโ€™t have to lift a shovel (something I donโ€™t particularly enjoy doing). There is very little bending involved (for those of us with older backs). There are no built-up piles of waste attracting insects, flies, or rodents searching for wasted pellets.

And best of all, it doesnโ€™t take too long!

Health, wellness, and air quality have proven to be easy to maintain with this system. I recommend it!

How Cleaning Works with Stacked Rabbit Cage Systems pinterest image

More General

  • A farmer is holding a meat rabbit kit.
    A Guide to Fostering Meat Rabbit Kits
  • Weighing a meat rabbit on a scale.
    Why You Should Continue to Weigh Adult Meat Rabbits
  • Storey's Guide to Raising Rabbits, 5th Edition: Breeds, Care, Housing by Bob Bennett
    5 Best Books for Raising Meat Rabbits
  • A gray meat rabbit in a cage.
    Rabbitry Goals and Directions

Reader Interactions

Comments

    Leave a Reply Cancel reply

    Your email address will not be published. Required fields are marked *

    Recipe Rating




  1. Nancy Tuuk

    July 23, 2025 at 11:00 am

    Do you ever have the rabbits on top peeing/pooping on the bottom cage when you have the tray out? Do you have any issues with them peeing on the very edge or corner of the cage and it splashing over the pan? I see that you don't use urine guards. When I had 2 bucks in quarantine in my garage in stacker cages, they were constantly messing all around the cages on the floor. Do you not have that issue?
    Thanks for all of your videos and articles.

    Reply
    • Mary Ward

      July 27, 2025 at 10:45 am

      Surprisingly, that doesn't happen very often. Sometimes, yes, someone will pee or poop when the tray is out. But it's pretty uncommon. This is why I work in sets of about 5 or 6 cages at a time and get the trays back in before I move on. As for the urination, for some reason I haven't noticed a lot of issues with bucks spraying or messing much outside their cages. I have had young bucks that were housed in large grow out cages together spray each other, which is another reason why I don't love keeping grow outs together for very long (at least not bucks). Occasionally I've had growouts spray their neighbors, but for the most part I don't have much of an issue with this type of thing at all. Hopefully I have them spaced well enough that no one feels that territorial about it.
      I do sometimes have a small issue when a buck backs up to their bathroom corner. Usually I can figure this out pretty quickly and slide the tray just far enough forward or back to catch the urine. You kind of just have to figure out their "spot". I'm not sure a urine guard would have stopped that anyway since it's a drop down issue.
      I do sprinkle lime on my barn floor to reduce flies, soak up spills, and keep odors down. If I do notice anyone (buck or doe) spraying outside the cage, I cover that spot. I probably worry less about these things than some people do because I am in a barn. I'm not in a space where I care about a house basement or garage floor, for example.
      Hope this helps! Always welcome questions!

      Reply

Primary Sidebar

Mary Ward rabbit homesteader

Welcome!

I'm a wife, mother, part-time "homesteader", gardener, and backyard meat grower. I've grown many types of animals for meat, but meat rabbits are by far my favorite, and in my opinion, the best meat animals for growing affordable, efficient, homegrown meat.

More about me

Popular

  • An adorable buck in a cage.
    Sourcing Meat Rabbits: Where Can You Buy Meat Rabbits?
  • A farmer holds a young meat rabbit.
    The Basic Cage and Equipment You Need to Start Meat Rabbits
  • An adorable white rabbit in a cage eats hay.
    How to Feed Meat Rabbits: What to Feed and How Much
  • Chicken broth ingredients in a pot.
    How to Make Rabbit Stock or Bone Broth

Recent

  • White Willow Bark for Meat Rabbits
    Willow for Meat Rabbits: How and When to Feed It
  • A Standard Rex Meat Rabbit.
    Standard Rex Meat Rabbit Breed Guide
  • A package of oregano leaves
    10 Reasons Oregano Is a Must-Have Herb for Meat Rabbits
  • A healthy thyme plant.
    16 Reasons to Feed Thyme for Meat Rabbits

Updated

  • A meat rabbit in a cage - Learn the dangers of ammonia in a rabbit barn.
    How and Why Ammonia Smells Are Bad For Meat Rabbits
  • A californian meat rabbit in a cage.
    Californian Meat Rabbit Breed Guide
  • New Zealand Meat Rabbit in a cage
    New Zealand Rabbit Breed Guide
  • A thirsty meat rabbit buck is drinking water.
    How Often Can You Breed a Meat Rabbit Buck?

Recent Comments

  1. Mary Ward on Heat Sterility in Meat Rabbits (Preparing For, and Managing)April 13, 2026

    Often that is enough to minimize or prevent heat sterility. Especially if you don't have heat waves that often. In…

  2. Mint Harvey on Heat Sterility in Meat Rabbits (Preparing For, and Managing)April 13, 2026

    Hi Mary, I was wondering, what kind of low temperature range are we looking at for giving respite to our…

  3. Mary Ward on Rabbit Urine Foliar SprayMarch 19, 2026

    That's great! Happy to help, and always willing to hear what other question or topics people would like to see…

  4. Paul on Rabbit Urine Foliar SprayMarch 19, 2026

    Amazing, the knowledge you share is so valuable, and so topical now our shop bought cow is criminally expensive. I…

  5. Mary Ward on Do You Need to Feed Hay to Meat Rabbits? Should You?March 2, 2026

    Hi Josef, I use cage cups that have a tab that goes over the wire in the cages. Probably similar…

Footer

โ†‘ back to top

About

  • Privacy Policy
  • About Us

Categories

  • Breeding
  • Breeds
  • Equipment
  • Feeding
  • FAQ
  • General
  • Health
  • Housing
  • Processing
  • Recipes

As an Amazon Associate I earn from qualifying purchases.

Copyright ยฉ 2026 Foodie Pro